Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Gm16198-201ENSMUST00000118766 670 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Gm44492-201ENSMUST00000197012 141 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Thap2-203ENSMUST00000218989 527 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Nr2e3Q9QXZ7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Gm2272-201ENSMUST00000194903 582 ntBASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Nr2e3Q9QXZ7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nr2e3Q9QXZ7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr2e3Q9QXZ7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Nr2e3Q9QXZ7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Nr2e3Q9QXZ7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Nr2e3Q9QXZ7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Gm10175-201ENSMUST00000086013 645 ntBASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nr2e3Q9QXZ7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Gm12892-201ENSMUST00000117367 1146 ntBASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17■□□□□ 0.31
Nr2e3Q9QXZ7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms