Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cml3Q9JIY8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Mir770-201ENSMUST00000103252 94 ntBASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cml3Q9JIY8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cml3Q9JIY8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cml3Q9JIY8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cml3Q9JIY8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms