Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm43125-201ENSMUST00000201724 730 ntBASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Gm5312-201ENSMUST00000203728 547 ntBASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ube3bQ9ES34 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Gm11543-201ENSMUST00000120758 370 ntBASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ube3bQ9ES34 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ube3bQ9ES34 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Gm2810-201ENSMUST00000118681 990 ntBASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ube3bQ9ES34 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms