Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim54Q9ERP3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim54Q9ERP3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim54Q9ERP3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim54Q9ERP3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Gm22175-201ENSMUST00000175007 78 ntBASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Gm20949-201ENSMUST00000206478 952 ntBASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim54Q9ERP3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Gm6973-201ENSMUST00000117080 721 ntBASIC16.29■□□□□ 0.2
Trim54Q9ERP3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim54Q9ERP3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim54Q9ERP3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm22065-201ENSMUST00000103753 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm22066-201ENSMUST00000103761 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm24932-201ENSMUST00000103763 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm24115-201ENSMUST00000103799 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm22190-201ENSMUST00000103827 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm22191-201ENSMUST00000103831 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm24721-201ENSMUST00000103849 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm28018-201ENSMUST00000103869 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm26399-201ENSMUST00000103937 110 ntBASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim54Q9ERP3 Gm24158-201ENSMUST00000175263 71 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms