Protein–RNA interactions for Protein: Q9D995

Cntd1, Cyclin N-terminal domain-containing protein 1, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntd1Q9D995 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cntd1Q9D995 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cntd1Q9D995 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cntd1Q9D995 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cntd1Q9D995 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Gm13836-201ENSMUST00000121159 501 ntBASIC14.35□□□□□ -0.11
Cntd1Q9D995 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.35□□□□□ -0.11
Cntd1Q9D995 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.35□□□□□ -0.11
Cntd1Q9D995 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.34□□□□□ -0.11
Cntd1Q9D995 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cntd1Q9D995 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cntd1Q9D995 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Cntd1Q9D995 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cntd1Q9D995 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.33□□□□□ -0.12
Cntd1Q9D995 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Gm27867-201ENSMUST00000184778 125 ntBASIC14.33□□□□□ -0.12
Cntd1Q9D995 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Gm9172-201ENSMUST00000212092 954 ntBASIC14.33□□□□□ -0.12
Cntd1Q9D995 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.33□□□□□ -0.12
Cntd1Q9D995 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cntd1Q9D995 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Gm25745-201ENSMUST00000174945 133 ntBASIC14.32□□□□□ -0.12
Cntd1Q9D995 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Cntd1Q9D995 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms