Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Hdhd3Q9CYW4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hdhd3Q9CYW4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hdhd3Q9CYW4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hdhd3Q9CYW4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms