Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Gm10154-201ENSMUST00000084445 354 ntBASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Otud1Q9CUB6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gm11434-201ENSMUST00000122379 629 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Rpph1-201ENSMUST00000175096 319 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Chchd1-203ENSMUST00000224633 557 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 BC037039-201ENSMUST00000192003 2205 ntBASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otud1Q9CUB6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otud1Q9CUB6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms