Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retreg3Q9CQV4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.21■□□□□ 0.03
Retreg3Q9CQV4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retreg3Q9CQV4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retreg3Q9CQV4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retreg3Q9CQV4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retreg3Q9CQV4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.21■□□□□ 0.02
Retreg3Q9CQV4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Gm14494-201ENSMUST00000118786 435 ntBASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retreg3Q9CQV4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retreg3Q9CQV4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm42651-201ENSMUST00000199851 1339 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retreg3Q9CQV4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms