Protein–RNA interactions for Protein: Q9CQJ1

Higd2a, HIG1 domain family member 2A, mousemouse

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Higd2aQ9CQJ1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Gm7229-201ENSMUST00000214719 1007 ntBASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Gm18246-201ENSMUST00000221023 728 ntBASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Higd2aQ9CQJ1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Gm17271-201ENSMUST00000165535 355 ntBASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Higd2aQ9CQJ1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Gm29361-201ENSMUST00000183323 2000 ntBASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Gm5867-201ENSMUST00000063197 592 ntBASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Higd2aQ9CQJ1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms