Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nipsnap3bQ9CQE1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nipsnap3bQ9CQE1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.85□□□□□ -0.03
Nipsnap3bQ9CQE1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms