Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Birc2-201ENSMUST00000054878 378 ntBASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rnf111Q99ML9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rnf111Q99ML9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm27459-201ENSMUST00000184860 107 ntBASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rnf111Q99ML9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Gm8344-201ENSMUST00000119813 856 ntBASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rnf111Q99ML9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms