Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-1Q99MA9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Gm27920-201ENSMUST00000183953 96 ntBASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Gm7775-201ENSMUST00000218871 853 ntBASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-1Q99MA9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gm12859-201ENSMUST00000117834 427 ntBASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-1Q99MA9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms