Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.22□□□□□ -0.29
Scrt1Q99M85 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Mir6977-201ENSMUST00000184960 64 ntBASIC13.22□□□□□ -0.29
Scrt1Q99M85 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.22□□□□□ -0.29
Scrt1Q99M85 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.21□□□□□ -0.29
Scrt1Q99M85 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Gm23547-201ENSMUST00000158210 271 ntBASIC13.21□□□□□ -0.29
Scrt1Q99M85 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Gm7774-201ENSMUST00000200064 533 ntBASIC13.21□□□□□ -0.29
Scrt1Q99M85 Thap2-203ENSMUST00000218989 527 ntBASIC13.21□□□□□ -0.29
Scrt1Q99M85 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scrt1Q99M85 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scrt1Q99M85 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.2□□□□□ -0.3
Scrt1Q99M85 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.2□□□□□ -0.3
Scrt1Q99M85 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scrt1Q99M85 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scrt1Q99M85 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms