Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Gm7153-201ENSMUST00000117092 455 ntBASIC13.75□□□□□ -0.21
Lims1Q99JW4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Gm18669-201ENSMUST00000216049 778 ntBASIC13.75□□□□□ -0.21
Lims1Q99JW4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Lims1Q99JW4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.74□□□□□ -0.21
Lims1Q99JW4 Gm12644-201ENSMUST00000119935 606 ntBASIC13.74□□□□□ -0.21
Lims1Q99JW4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lims1Q99JW4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lims1Q99JW4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.74□□□□□ -0.21
Lims1Q99JW4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Gm6296-201ENSMUST00000222599 943 ntBASIC13.73□□□□□ -0.21
Lims1Q99JW4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Lims1Q99JW4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lims1Q99JW4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms