Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm25016-201ENSMUST00000158399 131 ntBASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm6345-202ENSMUST00000180900 204 ntBASIC15.23■□□□□ 0.03
Cdk9Q99J95 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm7367-201ENSMUST00000057611 492 ntBASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cdk9Q99J95 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.22■□□□□ 0.03
Cdk9Q99J95 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdk9Q99J95 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.21■□□□□ 0.03
Cdk9Q99J95 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdk9Q99J95 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.2■□□□□ 0.02
Cdk9Q99J95 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdk9Q99J95 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.19■□□□□ 0.02
Cdk9Q99J95 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdk9Q99J95 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.19■□□□□ 0.02
Cdk9Q99J95 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms