Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gm14494-201ENSMUST00000118786 435 ntBASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Mir3113-201ENSMUST00000175478 76 ntBASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gm8000-201ENSMUST00000188378 592 ntBASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb22Q91XZ8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Gm5264-201ENSMUST00000190584 848 ntBASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Sybu-209ENSMUST00000228639 4113 ntBASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb22Q91XZ8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Gm27301-201ENSMUST00000184012 127 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Gm44492-201ENSMUST00000197012 141 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Gm5867-201ENSMUST00000063197 592 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Gm10154-201ENSMUST00000084445 354 ntBASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb22Q91XZ8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms