Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx1Q91VR5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 AA543401-201ENSMUST00000164248 1269 ntBASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Efs-202ENSMUST00000227037 2540 ntBASIC15.56■□□□□ 0.08
Ddx1Q91VR5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx1Q91VR5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx1Q91VR5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ddx1Q91VR5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ddx1Q91VR5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms