Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm13418-201ENSMUST00000119097 944 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm4535-201ENSMUST00000182274 558 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm10355-201ENSMUST00000097146 517 ntBASIC13.54□□□□□ -0.24
Odf4Q8VI88 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Odf4Q8VI88 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Odf4Q8VI88 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.53□□□□□ -0.24
Odf4Q8VI88 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Gm1401-201ENSMUST00000122048 772 ntBASIC13.53□□□□□ -0.24
Odf4Q8VI88 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Gm27525-201ENSMUST00000184465 107 ntBASIC13.53□□□□□ -0.24
Odf4Q8VI88 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Odf4Q8VI88 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.52□□□□□ -0.24
Odf4Q8VI88 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.52□□□□□ -0.25
Odf4Q8VI88 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Odf4Q8VI88 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Odf4Q8VI88 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms