Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Gm12644-201ENSMUST00000119935 606 ntBASIC15.61■□□□□ 0.09
Trim60Q8VI40 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.61■□□□□ 0.09
Trim60Q8VI40 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.61■□□□□ 0.09
Trim60Q8VI40 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim60Q8VI40 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Gm14859-201ENSMUST00000117752 357 ntBASIC15.6■□□□□ 0.09
Trim60Q8VI40 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.6■□□□□ 0.09
Trim60Q8VI40 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim60Q8VI40 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.6■□□□□ 0.09
Trim60Q8VI40 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.59■□□□□ 0.09
Trim60Q8VI40 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim60Q8VI40 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trim60Q8VI40 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim60Q8VI40 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.58■□□□□ 0.08
Trim60Q8VI40 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms