Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cspg4Q8VHY0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Gm12176-201ENSMUST00000121420 875 ntBASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Gm9719-201ENSMUST00000162765 543 ntBASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Gm27892-201ENSMUST00000185017 106 ntBASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Asic1-205ENSMUST00000228185 1818 ntBASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cspg4Q8VHY0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm15483-201ENSMUST00000120338 456 ntBASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cspg4Q8VHY0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cspg4Q8VHY0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Gm14042-201ENSMUST00000120139 833 ntBASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Gm5035-201ENSMUST00000215581 927 ntBASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cspg4Q8VHY0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms