Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdh18Q8VHR0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdh18Q8VHR0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 AA414768-201ENSMUST00000121924 1257 ntBASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Mir6404-201ENSMUST00000183699 94 ntBASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gm29518-201ENSMUST00000190858 372 ntBASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gm17808-201ENSMUST00000200859 894 ntBASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh18Q8VHR0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Gm6659-201ENSMUST00000174752 547 ntBASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh18Q8VHR0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh18Q8VHR0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh18Q8VHR0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms