Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.72■□□□□ 0.27
Ddx39aQ8VDW0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Gm16026-204ENSMUST00000162652 683 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 AA543401-201ENSMUST00000164248 1269 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Gm7774-201ENSMUST00000200064 533 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx39aQ8VDW0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx39aQ8VDW0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ddx39aQ8VDW0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Ddx39aQ8VDW0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Sybu-209ENSMUST00000228639 4113 ntBASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Mir449b-201ENSMUST00000104833 80 ntBASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ddx39aQ8VDW0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.68■□□□□ 0.26
Ddx39aQ8VDW0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms