Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Gm5177-201ENSMUST00000183092 997 ntBASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ndc1Q8VCB1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Chchd1-203ENSMUST00000224633 557 ntBASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ndc1Q8VCB1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ndc1Q8VCB1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms