Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Gm21362-201ENSMUST00000194272 928 ntBASIC15.11■□□□□ 0.01
Vps39Q8R5L3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Celf4-206ENSMUST00000224553 1729 ntBASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps39Q8R5L3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.1■□□□□ 0.01
Vps39Q8R5L3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Gm28033-201ENSMUST00000184224 96 ntBASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps39Q8R5L3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.09■□□□□ 0.01
Vps39Q8R5L3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Gm43347-201ENSMUST00000200226 580 ntBASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vps39Q8R5L3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.08■□□□□ 0.01
Vps39Q8R5L3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.08■□□□□ 0.01
Vps39Q8R5L3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vps39Q8R5L3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Vps39Q8R5L3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms