Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm10013-201ENSMUST00000106074 672 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm12008-201ENSMUST00000117791 755 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nup35Q8R4R6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Gm15039-201ENSMUST00000118914 875 ntBASIC12.3□□□□□ -0.44
Nup35Q8R4R6 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Gm45328-201ENSMUST00000210942 917 ntBASIC12.3□□□□□ -0.44
Nup35Q8R4R6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.3□□□□□ -0.44
Nup35Q8R4R6 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup35Q8R4R6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup35Q8R4R6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms