Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nup58Q8R332 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Gm18733-201ENSMUST00000173950 856 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.15■□□□□ 0.18
Nup58Q8R332 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Rps4l-201ENSMUST00000071745 943 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.15■□□□□ 0.18
Nup58Q8R332 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup58Q8R332 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nup58Q8R332 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nup58Q8R332 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Gm27867-201ENSMUST00000184778 125 ntBASIC16.14■□□□□ 0.17
Nup58Q8R332 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.14■□□□□ 0.17
Nup58Q8R332 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nup58Q8R332 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.14■□□□□ 0.17
Nup58Q8R332 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup58Q8R332 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup58Q8R332 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nup58Q8R332 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.13■□□□□ 0.17
Nup58Q8R332 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.13■□□□□ 0.17
Nup58Q8R332 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.13■□□□□ 0.17
Nup58Q8R332 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nup58Q8R332 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.13■□□□□ 0.17
Nup58Q8R332 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.13■□□□□ 0.17
Nup58Q8R332 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup58Q8R332 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.12■□□□□ 0.17
Nup58Q8R332 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Nup58Q8R332 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Gm12497-201ENSMUST00000138778 237 ntBASIC16.12■□□□□ 0.17
Nup58Q8R332 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup58Q8R332 Gm25745-201ENSMUST00000174945 133 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms