Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lrrtm1Q8K377 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Lrrtm1Q8K377 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrrtm1Q8K377 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gm10013-201ENSMUST00000106074 672 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gm9013-201ENSMUST00000132939 882 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gm25406-201ENSMUST00000157599 105 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrrtm1Q8K377 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrrtm1Q8K377 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lrrtm1Q8K377 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrrtm1Q8K377 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms