Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm19164-201ENSMUST00000210667 640 ntBASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cnot3Q8K0V4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnot3Q8K0V4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnot3Q8K0V4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnot3Q8K0V4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms