Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.66■□□□□ 0.58
Smc5Q8CG46 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smc5Q8CG46 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smc5Q8CG46 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
Smc5Q8CG46 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc5Q8CG46 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
Smc5Q8CG46 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc5Q8CG46 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smc5Q8CG46 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.64■□□□□ 0.57
Smc5Q8CG46 Mir7071-201ENSMUST00000184847 69 ntBASIC18.64■□□□□ 0.57
Smc5Q8CG46 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.64■□□□□ 0.57
Smc5Q8CG46 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smc5Q8CG46 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.63■□□□□ 0.57
Smc5Q8CG46 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.63■□□□□ 0.57
Smc5Q8CG46 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smc5Q8CG46 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smc5Q8CG46 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms