Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pabpn1Q8CCS6 BC001981-202ENSMUST00000191393 1545 ntBASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 AC133598.1-201ENSMUST00000224327 660 ntBASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pabpn1Q8CCS6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gm22018-201ENSMUST00000104357 131 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gm17823-201ENSMUST00000217830 1006 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gm29787-201ENSMUST00000222129 849 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Cts7-204ENSMUST00000225321 1257 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pabpn1Q8CCS6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Gm45667-201ENSMUST00000210380 1316 ntBASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Tcf21-202ENSMUST00000218002 1788 ntBASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pabpn1Q8CCS6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Pabpn1Q8CCS6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Pabpn1Q8CCS6 Gm22323-201ENSMUST00000103832 109 ntBASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Gm12749-201ENSMUST00000122138 1159 ntBASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Gm2383-201ENSMUST00000181461 807 ntBASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Gm42690-201ENSMUST00000197921 1836 ntBASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pabpn1Q8CCS6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Gm42627-201ENSMUST00000197347 224 ntBASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Gm43830-201ENSMUST00000198760 1067 ntBASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Rps4l-202ENSMUST00000204242 789 ntBASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
Pabpn1Q8CCS6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pabpn1Q8CCS6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms