Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Gm10499-201ENSMUST00000174094 934 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Gm24694-201ENSMUST00000180054 110 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Gm27663-201ENSMUST00000184839 110 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a6Q8C6K9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a6Q8C6K9 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 App-207ENSMUST00000227737 2827 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm16026-204ENSMUST00000162652 683 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm18062-201ENSMUST00000208020 547 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm18055-201ENSMUST00000208254 547 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col6a6Q8C6K9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col6a6Q8C6K9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms