Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Gm16026-204ENSMUST00000162652 683 ntBASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Gm44492-201ENSMUST00000197012 141 ntBASIC17.61■□□□□ 0.41
Usp44Q8C2S0 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp44Q8C2S0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm10154-201ENSMUST00000084445 354 ntBASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm10175-201ENSMUST00000086013 645 ntBASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp44Q8C2S0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp44Q8C2S0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp44Q8C2S0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.58■□□□□ 0.41
Usp44Q8C2S0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp44Q8C2S0 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.58■□□□□ 0.41
Usp44Q8C2S0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms