Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim47Q8C0E3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Gm45612-201ENSMUST00000211320 160 ntBASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim47Q8C0E3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Gm13365-201ENSMUST00000121188 973 ntBASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Gm11025-201ENSMUST00000140773 466 ntBASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim47Q8C0E3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Gm27494-201ENSMUST00000184735 189 ntBASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim47Q8C0E3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms