Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh3rf2Q8BZT2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Gm11543-201ENSMUST00000120758 370 ntBASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Gm10253-201ENSMUST00000194270 940 ntBASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh3rf2Q8BZT2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm25287-201ENSMUST00000103846 110 ntBASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22918-201ENSMUST00000103855 110 ntBASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm22175-201ENSMUST00000175007 78 ntBASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh3rf2Q8BZT2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Gm15483-201ENSMUST00000120338 456 ntBASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh3rf2Q8BZT2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms