Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Gm14494-201ENSMUST00000118786 435 ntBASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Aph1aQ8BVF7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Gm12008-201ENSMUST00000117791 755 ntBASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Aph1aQ8BVF7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gm13597-201ENSMUST00000121239 375 ntBASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gm17271-201ENSMUST00000165535 355 ntBASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gm2213-201ENSMUST00000197485 688 ntBASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Aph1aQ8BVF7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Aph1aQ8BVF7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms