Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scfd1Q8BRF7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scfd1Q8BRF7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scfd1Q8BRF7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scfd1Q8BRF7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scfd1Q8BRF7 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scfd1Q8BRF7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scfd1Q8BRF7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms