Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cpsf4Q8BQZ5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cpsf4Q8BQZ5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Mir5126-201ENSMUST00000175513 77 ntBASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm6550-201ENSMUST00000187574 993 ntBASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.64□□□□□ -0.07
Cpsf4Q8BQZ5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm15590-201ENSMUST00000078419 552 ntBASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cpsf4Q8BQZ5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cpsf4Q8BQZ5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Gm5682-201ENSMUST00000173402 505 ntBASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
Cpsf4Q8BQZ5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms