Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Gm5417-201ENSMUST00000079706 384 ntBASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smco3Q8BQM7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smco3Q8BQM7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smco3Q8BQM7 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smco3Q8BQM7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms