Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Srrm4Q8BKA3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Srrm4Q8BKA3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Srrm4Q8BKA3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Srrm4Q8BKA3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.08□□□□□ -0.31
Srrm4Q8BKA3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Srrm4Q8BKA3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Srrm4Q8BKA3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gm27300-201ENSMUST00000184085 97 ntBASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gm27335-201ENSMUST00000184758 97 ntBASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Srrm4Q8BKA3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srrm4Q8BKA3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Srrm4Q8BKA3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms