Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Clrn3Q8BHH8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 App-207ENSMUST00000227737 2827 ntBASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Gm11764-201ENSMUST00000120221 623 ntBASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.18□□□□□ -0.14
Clrn3Q8BHH8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Gm18489-201ENSMUST00000172565 551 ntBASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Gm5864-201ENSMUST00000202263 970 ntBASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clrn3Q8BHH8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Gm13884-201ENSMUST00000118103 829 ntBASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clrn3Q8BHH8 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms