Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.04□□□□□ -0.16
Atg4dQ8BGV9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Gm15427-201ENSMUST00000117288 531 ntBASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Atg4dQ8BGV9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Atg4dQ8BGV9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Gm4995-201ENSMUST00000117247 432 ntBASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.02□□□□□ -0.17
Atg4dQ8BGV9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Gm17271-201ENSMUST00000165535 355 ntBASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Atg4dQ8BGV9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms