Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.04■□□□□ -0
Rpp38Q80UU2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpp38Q80UU2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rpp38Q80UU2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Rpp38Q80UU2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rpp38Q80UU2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rpp38Q80UU2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.03■□□□□ -0
Rpp38Q80UU2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Gm5364-201ENSMUST00000216789 889 ntBASIC15.03■□□□□ -0
Rpp38Q80UU2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.03■□□□□ -0
Rpp38Q80UU2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rpp38Q80UU2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rpp38Q80UU2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpp38Q80UU2 Gm9727-201ENSMUST00000161387 555 ntBASIC15.02■□□□□ -0
Rpp38Q80UU2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.02■□□□□ -0
Rpp38Q80UU2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.02■□□□□ -0
Rpp38Q80UU2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpp38Q80UU2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
Rpp38Q80UU2 Gm5177-201ENSMUST00000183092 997 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms