Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pcdh19Q80TF3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdh19Q80TF3 Gm11745-201ENSMUST00000121669 448 ntBASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Dancr-204ENSMUST00000132389 2347 ntBASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdh19Q80TF3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Gm8396-201ENSMUST00000057361 823 ntBASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdh19Q80TF3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdh19Q80TF3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdh19Q80TF3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms