Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfx4Q7TNK1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rfx4Q7TNK1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Rfx4Q7TNK1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Rfx4Q7TNK1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rfx4Q7TNK1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms