Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sp140Q6NSQ5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gm5864-201ENSMUST00000202263 970 ntBASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sp140Q6NSQ5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sp140Q6NSQ5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gm45167-201ENSMUST00000208007 322 ntBASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sp140Q6NSQ5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sp140Q6NSQ5 Gm13884-201ENSMUST00000118103 829 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms