Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Gm8318-201ENSMUST00000182954 872 ntBASIC11.49□□□□□ -0.57
Zfp248Q640N4 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.49□□□□□ -0.57
Zfp248Q640N4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Zfp248Q640N4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Zfp248Q640N4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Zfp248Q640N4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.46□□□□□ -0.57
Zfp248Q640N4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Zfp248Q640N4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms