Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.06■□□□□ 0.16
Six2Q62232 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.06■□□□□ 0.16
Six2Q62232 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Six2Q62232 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Six2Q62232 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Six2Q62232 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.06■□□□□ 0.16
Six2Q62232 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.06■□□□□ 0.16
Six2Q62232 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.06■□□□□ 0.16
Six2Q62232 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Six2Q62232 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six2Q62232 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Six2Q62232 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
Six2Q62232 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Six2Q62232 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.05■□□□□ 0.16
Six2Q62232 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Six2Q62232 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.05■□□□□ 0.16
Six2Q62232 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Six2Q62232 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Six2Q62232 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
Six2Q62232 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.04■□□□□ 0.16
Six2Q62232 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.04■□□□□ 0.16
Six2Q62232 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.04■□□□□ 0.16
Six2Q62232 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.04■□□□□ 0.16
Six2Q62232 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Six2Q62232 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.04■□□□□ 0.16
Six2Q62232 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.03■□□□□ 0.16
Six2Q62232 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Six2Q62232 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.03■□□□□ 0.16
Six2Q62232 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Six2Q62232 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Six2Q62232 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Six2Q62232 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.02■□□□□ 0.16
Six2Q62232 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six2Q62232 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.02■□□□□ 0.16
Six2Q62232 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six2Q62232 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six2Q62232 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Six2Q62232 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Six2Q62232 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Six2Q62232 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms