Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VcanQ62059 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VcanQ62059 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.97□□□□□ -0.17
VcanQ62059 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VcanQ62059 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.97□□□□□ -0.17
VcanQ62059 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.97□□□□□ -0.17
VcanQ62059 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.97□□□□□ -0.17
VcanQ62059 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
VcanQ62059 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.97□□□□□ -0.17
VcanQ62059 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VcanQ62059 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VcanQ62059 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
VcanQ62059 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
VcanQ62059 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.96□□□□□ -0.17
VcanQ62059 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.96□□□□□ -0.17
VcanQ62059 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Gm29127-201ENSMUST00000188304 517 ntBASIC13.96□□□□□ -0.17
VcanQ62059 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.96□□□□□ -0.17
VcanQ62059 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
VcanQ62059 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VcanQ62059 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
VcanQ62059 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
VcanQ62059 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.96□□□□□ -0.18
VcanQ62059 Gm7561-201ENSMUST00000211203 886 ntBASIC13.96□□□□□ -0.18
VcanQ62059 Gm19220-201ENSMUST00000222682 803 ntBASIC13.96□□□□□ -0.18
VcanQ62059 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
VcanQ62059 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
VcanQ62059 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
VcanQ62059 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Gm4857-201ENSMUST00000192718 785 ntBASIC13.95□□□□□ -0.18
VcanQ62059 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.95□□□□□ -0.18
VcanQ62059 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.95□□□□□ -0.18
VcanQ62059 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.95□□□□□ -0.18
VcanQ62059 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Gm27839-201ENSMUST00000184242 106 ntBASIC13.95□□□□□ -0.18
VcanQ62059 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.95□□□□□ -0.18
VcanQ62059 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.95□□□□□ -0.18
VcanQ62059 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
VcanQ62059 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
VcanQ62059 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
VcanQ62059 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.94□□□□□ -0.18
VcanQ62059 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
VcanQ62059 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.94□□□□□ -0.18
VcanQ62059 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VcanQ62059 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms