Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rai1Q61818 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rai1Q61818 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rai1Q61818 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Rai1Q61818 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.39□□□□□ -0.11
Rai1Q61818 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.39□□□□□ -0.11
Rai1Q61818 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.39□□□□□ -0.11
Rai1Q61818 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Gm16476-201ENSMUST00000221544 139 ntBASIC14.39□□□□□ -0.11
Rai1Q61818 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.39□□□□□ -0.11
Rai1Q61818 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Rai1Q61818 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rai1Q61818 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rai1Q61818 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.38□□□□□ -0.11
Rai1Q61818 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rai1Q61818 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Mir1897-201ENSMUST00000122581 272 ntBASIC14.38□□□□□ -0.11
Rai1Q61818 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Gm27631-201ENSMUST00000184163 466 ntBASIC14.38□□□□□ -0.11
Rai1Q61818 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rai1Q61818 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.38□□□□□ -0.11
Rai1Q61818 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rai1Q61818 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rai1Q61818 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Gm14127-201ENSMUST00000117906 678 ntBASIC14.37□□□□□ -0.11
Rai1Q61818 Gm12138-201ENSMUST00000122180 951 ntBASIC14.37□□□□□ -0.11
Rai1Q61818 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rai1Q61818 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rai1Q61818 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rai1Q61818 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Gm37230-201ENSMUST00000194491 818 ntBASIC14.36□□□□□ -0.11
Rai1Q61818 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.36□□□□□ -0.11
Rai1Q61818 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.36□□□□□ -0.11
Rai1Q61818 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.36□□□□□ -0.11
Rai1Q61818 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rai1Q61818 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rai1Q61818 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.35□□□□□ -0.11
Rai1Q61818 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rai1Q61818 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.35□□□□□ -0.11
Rai1Q61818 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rai1Q61818 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.35□□□□□ -0.11
Rai1Q61818 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms