Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm18056-201ENSMUST00000207670 568 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm18061-201ENSMUST00000208350 562 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm18063-201ENSMUST00000208529 568 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm18052-201ENSMUST00000208750 559 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col12a1Q60847 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.68□□□□□ -0.06
Col12a1Q60847 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.67□□□□□ -0.06
Col12a1Q60847 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.67□□□□□ -0.06
Col12a1Q60847 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Gm45453-201ENSMUST00000211758 853 ntBASIC14.67□□□□□ -0.06
Col12a1Q60847 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.67□□□□□ -0.06
Col12a1Q60847 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.67□□□□□ -0.06
Col12a1Q60847 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Col12a1Q60847 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.67□□□□□ -0.06
Col12a1Q60847 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col12a1Q60847 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.66□□□□□ -0.06
Col12a1Q60847 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.66□□□□□ -0.06
Col12a1Q60847 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm6091-201ENSMUST00000098307 165 ntBASIC14.66□□□□□ -0.06
Col12a1Q60847 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm7561-201ENSMUST00000211203 886 ntBASIC14.66□□□□□ -0.06
Col12a1Q60847 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col12a1Q60847 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Gm18307-201ENSMUST00000206864 949 ntBASIC14.65□□□□□ -0.06
Col12a1Q60847 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.65□□□□□ -0.06
Col12a1Q60847 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.65□□□□□ -0.06
Col12a1Q60847 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.65□□□□□ -0.06
Col12a1Q60847 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col12a1Q60847 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col12a1Q60847 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms